 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
OPUNC03G03500.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
Family |
C2H2 |
Protein Properties |
Length: 208aa MW: 22445 Da PI: 10.1324 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC03G03500.1 | genome | OGE | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 13.4 | 0.00023 | 47 | 69 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+C C++ F++ L H++ H
OPUNC03G03500.1 47 YECVFCKRGFTTAQALGGHMNIH 69
99*******************99 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 208 aa
Download sequence Send
to blast |
MERGGDKEFM VEMALMSSPG QQEAMTLQAA AVTTSPTAAP AAARPYYECV FCKRGFTTAQ 60 ALGGHMNIHR RHRHRAKPPG RRDTRPTATG ITSTVSRDIG CYNQHRYLPY PPPPTSPPTS 120 SSFATSYAGG MAGVDGESKR AAGGSTGHVR ELSLFGGADS STDRDHDLHL RLGRHGRGGD 180 GSPRTPEGSP ERKPDLDLEL RLGRRPRH
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AC229755 | 1e-121 | AC229755.1 Oryza minuta clone OM__Ba0175J13, complete sequence. |