|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
OPUNC02G25450.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
Family |
ERF |
Protein Properties |
Length: 261aa MW: 27044.8 Da PI: 5.5664 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC02G25450.1 | genome | OGE | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 51.7 | 2.2e-16 | 69 | 117 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
y+G+r ++ +g+Wv+eIr+p+ + +r++lg++ tae+Aa+a++ a+++l+g+
OPUNC02G25450.1 69 YRGIR-CR-SGKWVSEIREPR----KaRRIWLGTYPTAEMAAAAYDVAARALRGA 117
9***9.55.6*********94....36*************************995 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 261 aa
Download sequence Send
to blast |
MADLTEHPSS TAPPQVQTAG LPAAASPGPA SPHSPPEQGD KTAPGAATAS TTASSGEPSP 60 RSSGKHAFYR GIRCRSGKWV SEIREPRKAR RIWLGTYPTA EMAAAAYDVA ARALRGADAV 120 LNFPGATASR PVPASASPAD IRAAAAAAAA AAAHLERPHE GEAHRTGTAY PTTAAAEHHQ 180 QQQQYGTGSP AAEDVAGYPP MEGGIGNDDF MDEEAIFELP QLLRNMAAGM MMSPPRLSPT 240 TSDVSPEPSE AGESLWSYRD P
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AK243146 | 0.0 | AK243146.1 Oryza sativa Japonica Group cDNA, clone: J100032D11, full insert sequence. |
GenBank | AP005775 | 0.0 | AP005775.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OSJNBb0005A04. |
GenBank | AP006060 | 0.0 | AP006060.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, PAC clone:P0135D07. |
GenBank | AP014958 | 0.0 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. |