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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC02G24210.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 288aa MW: 29638.5 Da PI: 4.8263 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC02G24210.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60.6 | 3.5e-19 | 98 | 148 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+ y+GVr+++ +g+Wv+eIr+p++ + r++lg+f tae+Aa+a++ a+++++g
OPUNC02G24210.1 98 PSYRGVRRRS-WGKWVSEIREPRK---KSRIWLGTFPTAEMAARAHDVAALAIKG 148
57*****887.**********843...6***********************9987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 288 aa
Download sequence Send
to blast |
MEAAAIHAPT TSSDSGSCVT NGTREKHEIS KPKQLKRKRS TSPAAPPLGC GGQGQEAAVE 60 TDAGAARGGG AGEEESSSCG GGGERAGVRK RDDAGRHPSY RGVRRRSWGK WVSEIREPRK 120 KSRIWLGTFP TAEMAARAHD VAALAIKGRA AHLNFPSLAH TLPRPASTSP SDIQAAAALA 180 AAAATDQCES SSSSSAVAAA AATDAEATES TSSAAASPCA VTSSVEENAL FDLPDLLLDL 240 SDGLWCSPVW TAPADQYDDG DDGDDAAAPL LWAEQCWMDA TAPSVQPD
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CT837654 | 0.0 | CT837654.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN054J01, full insert sequence. |