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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC02G24070.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 307aa MW: 32023.5 Da PI: 5.7653 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC02G24070.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 62.2 | 1.2e-19 | 151 | 201 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+++AeIrdp +ng +r++lg+f++aeeAa a+++a+ +++g
OPUNC02G24070.1 151 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTFDSAEEAAVAYDRAAYRMRG 201
8********.***********9987..*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0001944 | Biological Process | vasculature development |
GO:0010200 | Biological Process | response to chitin |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0051301 | Biological Process | cell division |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 307 aa
Download sequence Send
to blast |
MLLNPASREV AALDSIRHHL LEEEETPAAA PAPVRRPVYC RSSSFGSLVA DQWSESLPFR 60 PNDAEDMVVY GALRDAFSSG WLPDGSFAAV KPESQDSYDG SSIGSFLASS SEAEAPGEVT 120 STEVAMTPGI REDGNGEGEG EAMAVASRGK HYRGVRQRPW GKFAAEIRDP AKNGARVWLG 180 TFDSAEEAAV AYDRAAYRMR GSRALLNFPL RIGSEIAAAA AAAAAAAGNK RPYHDPASSG 240 SSSPSSSSSS SSSSSSGSAK RRKRGEAAAA SMAMALVPPP PPAQGPMQLA LPAQPWFAAG 300 PVQQLVS
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Functional Description ? help
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Source |
Description |
UniProt | Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. {ECO:0000269|PubMed:10715325, ECO:0000269|PubMed:11950980, ECO:0000269|PubMed:9756931}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by Pseudomonas syringae tomato (both virulent and avirulent avrRpt2 strains), independently of PAD4. Also induced by methyl jasmonate (MeJA) independently of JAR1. Ethylene induction is completely dependent on a functional ETHYLENE-INSENSITIVE2 (EIN2), whereas induction by wounding does not need EIN2. Induction by salicylic acid (SA) seems to be independent of PAD4 and NPR1. Transcripts accumulate strongly in cycloheximide-treated plants, a protein synthesis inhibitor. Seems to not be influenced by exogenous abscisic acid (ABA), cold, heat, NaCl or drought stress. {ECO:0000269|PubMed:10715325, ECO:0000269|PubMed:11950980}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK105940 | 0.0 | AK105940.1 Oryza sativa Japonica Group cDNA clone:001-205-B11, full insert sequence. |
GenBank | AP004676 | 0.0 | AP004676.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OJ1003_B06. |
GenBank | AP014958 | 0.0 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. |
GenBank | AY831394 | 0.0 | AY831394.1 Oryza sativa (indica cultivar-group) BTH-induced ERF transcriptional factor 3 (BIERF3) mRNA, complete cds. |