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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC02G23740.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
HD-ZIP |
Protein Properties |
Length: 253aa MW: 27870.7 Da PI: 4.6538 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC02G23740.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 56.9 | 3.6e-18 | 59 | 112 | 4 | 56 |
-SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 4 RttftkeqleeLeelFek.nrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+++ft+eq++ Le+ F+ ++ +e++eLA++lgL+ rqV +WFqN+Ra+++
OPUNC02G23740.1 59 KRRFTEEQVRSLETTFHArRAKLEPREKAELARELGLQPRQVAIWFQNKRARWR 112
458**************8899********************************9 PP
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2 | HD-ZIP_I/II | 123.1 | 1.3e-39 | 57 | 150 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeee.kLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
e+krr+++eqv++LE++F++++ kLep++K+elareLglqprqva+WFqn+RAR+++kq+E+dy+aL+++ydal+++ ++L++e+ +L+++++e
OPUNC02G23740.1 57 ERKRRFTEEQVRSLETTFHARRaKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQIEHDYAALRAQYDALHARVDSLKQEKLALAAQVDE 150
69*****************9999******************************************************************99976 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 253 aa
Download sequence Send
to blast |
MESDCQFLLA PPPQPHMYYD TAATADEAQF LRQMVAAADH HAAAAGRGGG DGGGGGERKR 60 RFTEEQVRSL ETTFHARRAK LEPREKAELA RELGLQPRQV AIWFQNKRAR WRSKQIEHDY 120 AALRAQYDAL HARVDSLKQE KLALAAQVDE LRGKLNERQD QSGSSCDGGA EGDDDDKRNS 180 VNASSSGLVE EDVSCLAVPV VDVSEDGSAA CGGSSYEYDH HLDYLDGGQL PDPFCAMPDL 240 WETWPLVEWN AVA
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: In leaves by drought stress. {ECO:0000269|PubMed:17999151}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK063685 | 0.0 | AK063685.1 Oryza sativa Japonica Group cDNA clone:001-119-F01, full insert sequence. |
GenBank | EU847515 | 0.0 | EU847515.1 Oryza sativa Japonica Group clone OsHD6B homeobox leucine zipper protein mRNA, complete cds. |