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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC02G17880.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 219aa MW: 22573.4 Da PI: 8.5161 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC02G17880.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 63.6 | 4e-20 | 99 | 148 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W+AeIrdp+ + +r++lg+f tae+Aa+a++aa+++++g
OPUNC02G17880.1 99 RYRGVRRRP-WGKWAAEIRDPR----KaARIWLGTFATAEDAARAYDAAALRFRG 148
7********.**********94....36*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 219 aa
Download sequence Send
to blast |
MAALFGAAET AAIVAALTCV IADGRGGGVG VPLPAPSLVV PPRVGTGSEH DDGRRVVWDE 60 EPAVGVISAG DHAGEASMAE AEAAAAAAAI VVAPATVRRY RGVRRRPWGK WAAEIRDPRK 120 AARIWLGTFA TAEDAARAYD AAALRFRGRR AKLNFSEEAS RSCRLSQGND HMSCSPSIAN 180 AHLLGSWTAG PPPPSLSATT MTTLLGGSHG SNGAENGRE
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP005611 | 1e-102 | AP005611.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OSJNBa0051E21. |
GenBank | AP014958 | 1e-102 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. |