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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC02G16450.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 266aa MW: 27520.9 Da PI: 10.3016 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC02G16450.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 64.4 | 2.4e-20 | 102 | 151 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W+AeIrdp + + +r++lg+f+tae Aa+a++ a+++++g
OPUNC02G16450.1 102 HYRGVRRRP-WGKWAAEIRDP---N-KaARVWLGTFDTAEAAAAAYDDAALRFKG 151
7********.**********9...3.35************************988 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 266 aa
Download sequence Send
to blast |
MSSPQPLGSG GRAPPDWHVE QRQPVDAAVT MAAAYGTMRY HQYHPHIAVP PGPTPSSETT 60 TDWRPPAAQG EEMGPAAAAA AAAQAVDAQG AVAAAAAAAE RHYRGVRRRP WGKWAAEIRD 120 PNKAARVWLG TFDTAEAAAA AYDDAALRFK GAKAKLNFPE RVRGRTGQGG FLVSPAVPRP 180 PHAVTAPAVT PAPSPFPDLI RYARLLRSGD AHDAAAAPAQ ILDFAAQRLV GVSPAMAPRP 240 PSTLPTTTAT SSPSAWPHGG GGGHGS
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP005749 | 1e-141 | AP005749.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OSJNBa0047A17. |
GenBank | AP005842 | 1e-141 | AP005842.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OSJNBb0003H22. |
GenBank | AP014958 | 1e-141 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. |