 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
OPUNC02G09610.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
NAC |
| Protein Properties |
Length: 354aa MW: 38979.2 Da PI: 6.7611 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC02G09610.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 165.2 | 2.3e-51 | 10 | 145 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
+ppGfrFhPtdeel+ +yL+kkv+ + ++l +vi+e+d++k+ePwdL+ ++ + ++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk+
OPUNC02G09610.1 10 VPPGFRFHPTDEELLYYYLRKKVAYEAIDL-DVIREIDLNKLEPWDLKDrcRIGTgPQEEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKA 102
69****************************.9***************943444442456*********************************** PP
NAM 92 vlsk......kgelvglkktLvfykgrapkgektdWvmheyrl 128
++ g+ +gl+ktLvfy+grap+g+ktdW+mheyrl
OPUNC02G09610.1 103 IFLGngggsgAGQRIGLRKTLVFYTGRAPHGKKTDWIMHEYRL 145
**988887777777***************************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 354 aa
Download sequence Send
to blast |
MHPNGAPLTV PPGFRFHPTD EELLYYYLRK KVAYEAIDLD VIREIDLNKL EPWDLKDRCR 60
IGTGPQEEWY FFSHKDKKYP TGTRTNRATA AGFWKATGRD KAIFLGNGGG SGAGQRIGLR 120
KTLVFYTGRA PHGKKTDWIM HEYRLDDDNV DVPEEGWVVC RVFKKKSIHQ RGFDQPDMAA 180
AVADEEELRY QLHGMSPVEV VDQKHVLQEQ LAHGHGGGFV VPAFDASMHL PQLASADAAP 240
CGGGGGHVAF ASMNPLDAVG CGSQNMMMKM AATSGGEMLM SGGVDGGRFG AAADWSILDK 300
LLASHQNLDQ LFHGKVAGAH QQQQQMAMDA SSLQRLPFHH YLGLEAADLL KFSM
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-51 | 8 | 171 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-51 | 8 | 171 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-51 | 8 | 171 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-51 | 8 | 171 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-51 | 8 | 171 | 18 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 1e-51 | 8 | 171 | 18 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 1e-51 | 8 | 171 | 18 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 1e-51 | 8 | 171 | 18 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 1e-51 | 8 | 171 | 18 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 1e-51 | 8 | 171 | 18 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 1e-51 | 8 | 171 | 18 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 1e-51 | 8 | 171 | 18 | 174 | NAC domain-containing protein 19 |
| 4dul_A | 1e-51 | 8 | 171 | 15 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 1e-51 | 8 | 171 | 15 | 171 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor involved in stress response. {ECO:0000250|UniProtKB:Q7F2L3}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK063943 | 0.0 | AK063943.1 Oryza sativa Japonica Group cDNA clone:001-123-E07, full insert sequence. |
| GenBank | AK101280 | 0.0 | AK101280.1 Oryza sativa Japonica Group cDNA clone:J033033C18, full insert sequence. |
