PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OPUNC02G08840.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | BES1 | ||||||||
Protein Properties | Length: 376aa MW: 38960.4 Da PI: 9.6856 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 174.7 | 4.7e-54 | 7 | 167 | 1 | 145 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr..........kgskpl.eeaeaag 83 gg+gr ptw+ErEnn+rRERrRRaiaakiyaGLRa+Gny lpk++DnneVlkALc+eAGw+ve+DGttyr ++ k+ +++++g OPUNC02G08840.1 7 GGGGRVPTWRERENNRRRERRRRAIAAKIYAGLRAYGNYTLPKHCDNNEVLKALCNEAGWTVEPDGTTYRkywsldrieaAHVKKGlVKEAIMG 100 689*******************************************************************666666555544444455666777 PP DUF822 84 ssasaspesslqsslkssalaspvesysaspk.sssfpspssldsislasa....asllpvlsvlsl 145 + + p s+l +l s asp++sy++sp+ +ssfps+ s+++i++ +sl+p+l++ls+ OPUNC02G08840.1 101 TKGCKPPASELADQLGRSPSASPCSSYQPSPRgTSSFPSSGSSSQITIGGGggegSSLIPWLKTLSS 167 777788888888999999************984689**********9987789999******99986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 4.9E-60 | 8 | 166 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
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Protein Sequence Length: 376 aa Download sequence Send to blast |
MMNGGGGGGG RVPTWREREN NRRRERRRRA IAAKIYAGLR AYGNYTLPKH CDNNEVLKAL 60 CNEAGWTVEP DGTTYRKYWS LDRIEAAHVK KGLVKEAIMG TKGCKPPASE LADQLGRSPS 120 ASPCSSYQPS PRGTSSFPSS GSSSQITIGG GGGEGSSLIP WLKTLSSAGV GGGSSSSKFP 180 AHYSYFGGGS ISAPVTPPSG SPPRTPRLKT AAWEEYHHAS SVLPPWAAGA SYAYASSLPN 240 STPPSPRRKV AAAAGGGNDP AAWLAGFQIS SAGPSSPTYS LMAPPNPFGA AAASGSSSRR 300 MVMGTPGQSG TCSPVAAGDV QMVDAARREF AFGGEGGGGD KMTGLVKAWE GERIHEECGS 360 DDLELTLGSS MTRADR |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 4e-20 | 11 | 77 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 4e-20 | 11 | 77 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 4e-20 | 11 | 77 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 4e-20 | 11 | 77 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | May function in brassinosteroid signaling. {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP004070 | 0.0 | AP004070.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OJ1705_E12. | |||
GenBank | AP014958 | 0.0 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015624154.1 | 1e-151 | protein BZR1 homolog 4 | ||||
Swissprot | Q6EUF1 | 1e-153 | BZR4_ORYSJ; Protein BZR1 homolog 4 | ||||
TrEMBL | A0A0E0JXR8 | 0.0 | A0A0E0JXR8_ORYPU; Uncharacterized protein | ||||
STRING | OPUNC02G08840.1 | 0.0 | (Oryza punctata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1366 | 38 | 112 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78700.1 | 4e-57 | BES1/BZR1 homolog 4 |