 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OPUNC02G07680.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
NAC |
| Protein Properties |
Length: 195aa MW: 21414.1 Da PI: 5.5058 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC02G07680.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 51.9 | 2.6e-16 | 4 | 84 | 52 | 128 |
NAM 52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk...kgelvglkktLvfykgrapkge....ktdWvmheyrl 128
++++++ yfF+ + +++ + ++r+t sg+Wk tg++k++++ ++ + +k+ +vf+ g+++++ kt W+mheyrl
OPUNC02G07680.1 4 YGSDHDRYFFTMATREA---QASRRTTPSGFWKPTGTKKTIFVVagaHEVPTAVKRRFVFHLGHHQQPLgdnnKTPWIMHEYRL 84
4567889*****99976...478899***************99866666679*********665444322234*********98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 195 aa
Download sequence Send
to blast |
MAMYGSDHDR YFFTMATREA QASRRTTPSG FWKPTGTKKT IFVVAGAHEV PTAVKRRFVF 60
HLGHHQQPLG DNNKTPWIMH EYRLINPPRA AAAVAPPSSP VNTIAAMEEI VLCRISNKDL 120
PKPPCLSLHN GLLQFSSVGL SGDDAYNYLI LDLEPLAMEY PNVDIGNVDD DAAAATDDPG 180
DLDEEVDSMP RNHGG
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | CP012610 | 1e-143 | CP012610.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 2 sequence. |
| GenBank | DQ448817 | 1e-143 | DQ448817.1 Oryza sativa (indica cultivar-group) genomic sequence. |
