 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OPUNC01G44450.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
WRKY |
| Protein Properties |
Length: 367aa MW: 40523.1 Da PI: 5.0984 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC01G44450.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 99.1 | 2.7e-31 | 146 | 202 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58
dDgy+WrKYGqK++k+s++prsYYrCt ++C++kk+ver+ ++p+++++tYeg H h
OPUNC01G44450.1 146 DDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCNAKKQVERALDEPDTLIVTYEGLHLH 202
8******************************************************99 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 367 aa
Download sequence Send
to blast |
MQESRKYWRD GDVVGEELLR EILDETAAAV HSNSNSNSNS NSNSKEEEEE EREYFAAAMA 60
PCGRRRRQSM VNKLISTVYS GPTISDIESA LSFTAGGDQQ LIADGHNFTA SCTPAVFSPE 120
KTLSKTMENK YTLKMKSCGN NGGLADDGYK WRKYGQKSIK NSPNPRSYYR CTNPRCNAKK 180
QVERALDEPD TLIVTYEGLH LHYTYSHFLH STASSSSTTT QQQLQPQPPQ LSKKPKLHLH 240
DDPPPPPEME DTTMMIMQSF SSQQQHQLLP ADMMMASDDC YINGSSLMMS LDDEQAAAGG 300
LLEDVVPLLV RRPTSCNNYY SPATTCTSDN DGSSASPSPS ISSSVSVSSW TTPMSPCIDM 360
AILSNIF
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK110625 | 0.0 | AK110625.1 Oryza sativa Japonica Group cDNA clone:002-169-B02, full insert sequence. |
| GenBank | AY341842 | 0.0 | AY341842.1 Oryza sativa (japonica cultivar-group) WRKY1 mRNA, complete cds. |
| GenBank | AY870605 | 0.0 | AY870605.1 Oryza sativa (japonica cultivar-group) WRKY17 mRNA, complete cds. |
