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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
OPUNC01G35610.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
WOX |
| Protein Properties |
Length: 296aa MW: 31711.9 Da PI: 10.0604 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC01G35610.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 65 | 1.1e-20 | 44 | 103 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
R+t+tkeq+ +Le l+++ r+p+ae++++++++l +++ ++V++WFqN++a++++
OPUNC01G35610.1 44 ARWTPTKEQIAVLEGLYRQgLRTPTAEQIQQITARLrehgHIEGKNVFYWFQNHKARQRQ 103
7*****************99**************************************96 PP
|
| 2 | Wus_type_Homeobox | 115.6 | 2.4e-37 | 43 | 105 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
++RWtPt+eQi +Le ly++GlrtP++e+iq+ita+L+e+G+ie+kNVfyWFQN+kaR+rqkq
OPUNC01G35610.1 43 NARWTPTKEQIAVLEGLYRQGLRTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKARQRQKQ 105
78***********************************************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 296 aa
Download sequence Send
to blast |
METTTTTTLG GGGGGRAGGF SDPPSPLSPP LSPASAAAAA LANARWTPTK EQIAVLEGLY 60
RQGLRTPTAE QIQQITARLR EHGHIEGKNV FYWFQNHKAR QRQKQKQQSF DYFSKLFRRP 120
PPLPVLHRPL ARPFPLALAP TAMPPPPPTT AACNAGGVMF RPPSFMPAAA NNAGYYPQQQ 180
TPVLYPGMEH EVCPNNKSMA QPPATTMYLT APISAHLAPA AGRGTGRETL QLFPLQPTFV 240
LPDHKPRRAG SACAAAVSLT TPSASASFSW ESESSDSPSS EAPPFYDFFG VHSGGR
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor which may be involved in developmental processes. {ECO:0000250}. |
| UniProt | Transcription factor which may be involved in developmental processes. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP003241 | 0.0 | AP003241.3 Oryza sativa Japonica Group genomic DNA, chromosome 1, PAC clone:P0408C03. |
| GenBank | AP014957 | 0.0 | AP014957.1 Oryza sativa Japonica Group DNA, chromosome 1, cultivar: Nipponbare, complete sequence. |
| GenBank | CP012609 | 0.0 | CP012609.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 1 sequence. |
