 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OPUNC01G34300.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
WRKY |
| Protein Properties |
Length: 279aa MW: 29362.7 Da PI: 5.0037 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC01G34300.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 76.7 | 2.7e-24 | 109 | 167 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSSTTEEEEEEES--SS CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedpkvveitYegeHnh 58
Dg+ WrKYGqK+++g ++pr YYrC+++ gC ++++v++s++dp +++i Y geH++
OPUNC01G34300.1 109 ADGFIWRKYGQKDINGCKHPRLYYRCAFRgqGCLATRRVQQSQDDPAAFVIAYYGEHTC 167
6***************************9999*************************98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 279 aa
Download sequence Send
to blast |
MALGSSAAVV MELMTMGYQS AAYLGELLRS ASPATAGEQQ ELAAEILRCC DRVIAKLSRG 60
ATGATTGKKR KAADAAAAAA TSSSLPVTPT KRRARGAEAE REVRSGTTAD GFIWRKYGQK 120
DINGCKHPRL YYRCAFRGQG CLATRRVQQS QDDPAAFVIA YYGEHTCGGD AATAAAAAAC 180
RDGELMPPAV INSGGASNFT VAWNMGSHEP ASLAVEQRSC DGDAPSETSQ GWSPSFSSEV 240
ELDVAGFEVA GADEPWANSS PVWEFLNGSF DWESVINSL
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK108657 | 0.0 | AK108657.1 Oryza sativa Japonica Group cDNA clone:002-148-E07, full insert sequence. |
| GenBank | AY870606 | 0.0 | AY870606.1 Oryza sativa (japonica cultivar-group) WRKY21 mRNA, complete cds. |
