 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
OPUNC01G34280.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
Family |
WRKY |
Protein Properties |
Length: 362aa MW: 39396.1 Da PI: 6.509 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC01G34280.1 | genome | OGE | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 63.8 | 2.9e-20 | 122 | 184 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSST..TEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedp..kvveitYegeHnhe 59
+Dgy+WrKYGqK++++ ++ r YY+Ct++ +C +kk+v++++ + + +tY +eH+++
OPUNC01G34280.1 122 KDGYQWRKYGQKNIQDRNYLRLYYKCTFSrerRCAAKKQVQQQDGGEpvPMYLVTYLNEHTCQ 184
7**************************998899*********99544125899********97 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 362 aa
Download sequence Send
to blast |
MAFGQDTIEQ LYRELAGGRH LSAKLQALLE GPLDSRGQEE AADVSRELGR VFMVSLYMLK 60 PCSSSGRTEE VMTRTAPETR TDDSICLHTS KKVKRIRSEL VPLRNGREEM VTRTEITPSP 120 YKDGYQWRKY GQKNIQDRNY LRLYYKCTFS RERRCAAKKQ VQQQDGGEPV PMYLVTYLNE 180 HTCQLQPQQA VPGTPATAAS SPTTTTSRRQ SSSPPAEGLD STRNGAGGLF GRHLLLPHAV 240 GGGGGGGIDE EEAAIVMCLA TVISGGGAAA AAPPPLSWPS RVVPAFVASA GHSPSADESV 300 ADEAAAKMAD MDYCFQYDPS TFEAAADHHH RVLIGDDGDV PRVARITDTA DRWDVNQLCS 360 NH
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AP003302 | 1e-111 | AP003302.2 Oryza sativa Japonica Group genomic DNA, chromosome 1, PAC clone:P0703B11. |
GenBank | AP003348 | 1e-111 | AP003348.3 Oryza sativa Japonica Group genomic DNA, chromosome 1, PAC clone:P0485B12. |
GenBank | AP014957 | 1e-111 | AP014957.1 Oryza sativa Japonica Group DNA, chromosome 1, cultivar: Nipponbare, complete sequence. |