|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
OPUNC01G32930.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
Family |
ERF |
Protein Properties |
Length: 235aa MW: 24338.5 Da PI: 9.7587 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC01G32930.1 | genome | OGE | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 66 | 7.6e-21 | 32 | 83 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
++y+GVr ++ +gr++AeIrdp k+ r++lg+++taeeAa+a++aa+++++g+
OPUNC01G32930.1 32 PHYRGVRKRP-WGRYAAEIRDPA---KKSRVWLGTYDTAEEAARAYDAAAREFRGA 83
68********.**********83...36*************************985 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 235 aa
Download sequence Send
to blast |
MAPRAATVEK VAVAPPTGLG LGVVGGVGAG GPHYRGVRKR PWGRYAAEIR DPAKKSRVWL 60 GTYDTAEEAA RAYDAAAREF RGAKAKTNFP FASQSMVDCG GSPSSNSTVD TGGGGVQTPM 120 QALPLPPTLD LDLFHRAASV TAVAGTGVRF PFRGYPVARP ATHPYFFYEQ AAAAAAAAAG 180 YRMMKLAPPV TVAAVAQSDS DSSSVVDLAP SPPAVTVNRA AAFDLDLNRP PPVEN
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AB036883 | 0.0 | AB036883.1 Oryza sativa mRNA for osERF3, complete cds. |
GenBank | AB037183 | 0.0 | AB037183.1 Oryza sativa osERF3 mRNA for ethylene responsive element binding factor3, complete cds. |
GenBank | AK061380 | 0.0 | AK061380.1 Oryza sativa Japonica Group cDNA clone:006-304-H01, full insert sequence. |
GenBank | AP003299 | 0.0 | AP003299.3 Oryza sativa Japonica Group genomic DNA, chromosome 1, PAC clone:P0699H05. |
GenBank | AP014957 | 0.0 | AP014957.1 Oryza sativa Japonica Group DNA, chromosome 1, cultivar: Nipponbare, complete sequence. |
GenBank | KM262835 | 0.0 | KM262835.1 Oryza sativa Indica Group cultivar Nagina 22 Aptella 2-like transcription factor (AP37) mRNA, complete cds. |