 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OPUNC01G31740.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
bHLH |
| Protein Properties |
Length: 313aa MW: 34283.8 Da PI: 5.1301 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC01G31740.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 22.6 | 1.9e-07 | 121 | 152 | 4 | 37 |
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS- CS
HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskK 37
h +rEr RR+r+ ++++ L+ +lP+ as s K
OPUNC01G31740.1 121 RHIMRERLRRERLSQGYADLQAILPTgAS---SSK 152
599***********************884...443 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 313 aa
Download sequence Send
to blast |
MEDDDVDHPF YFAHDAATGV DVVDDEELLA SLGFLLPPPL ATVQSAFAAY QSSMTESDLS 60
RRFRSSPANV HRRMHEYLRS IDDGAGGAGV TVEMQVEADE RAVEQQQVAP IGSGGGSARF 120
RHIMRERLRR ERLSQGYADL QAILPTGASS SKVVMIHQKF KITPALINYG GKNYIVGAAA 180
SYIRELEGRK GWLRARNEEM ERTTPKPGAG MVVKVRAETE FGSTLDVFEA VLRRLKAMDE 240
LQVTVIQSCF GAGGMWMDVA VESKAKVSSR EVDKAITNAL EELQEIKSSC LQDPISSGMS 300
FSCQVESGVL LMS
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP003265 | 1e-113 | AP003265.4 Oryza sativa Japonica Group genomic DNA, chromosome 1, PAC clone:P0490D09. |
| GenBank | AP014957 | 1e-113 | AP014957.1 Oryza sativa Japonica Group DNA, chromosome 1, cultivar: Nipponbare, complete sequence. |
| GenBank | CP012609 | 1e-113 | CP012609.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 1 sequence. |
