PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OPUNC01G30390.1

Organism

Oryza punctata

Taxonomic ID

4537

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 279aa MW: 29974.8 Da PI: 6.0983

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OPUNC01G30390.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	36.8	8.5e-12	137	176	4	43
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNk 43 kr +r NR +A+rsR RK+++i eLe+ v +L++eN+ OPUNC01G30390.1 137 PKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTENR 176 5999***********************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	6.8E-8	134	199	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.301	136	175	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.09E-10	138	182	No hit	No description
Pfam	PF00170	4.5E-10	138	177	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	9.7E-12	138	176	No hit	No description
CDD	cd14703	2.55E-19	139	177	No hit	No description
PROSITE pattern	PS00036	0	141	156	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence Send to blast
MAQLPPKIPV AAPGHHQHWA SAGGAGDAAW ADEFAEFAAS RRGAHRRSLS DSVAFVEVAP 60 AGCGAGGEFD RLDDDQLMSM FPDEGGSSAP GSDNGGSDSD GGDKHAAAQS DDGQHAAGEP 120 TQEQAAAASP TELIRDPKRV KRILANRQSA QRSRVRKLQY ISELERSVTT LQTENRTPYL 180 NSTNSRQINR SWLCNLCNVS DPSISFTDRS GQLRPTDGHR LAGNSTQGGE EMSNEVSVLS 240 PRVAFLDQQR TILTVGNSHL KQRIAALAQD KIFKDDDRS

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription regulator. {ECO:0000250}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK108553	0.0	AK108553.1 Oryza sativa Japonica Group cDNA clone:002-144-E08, full insert sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015634100.1	1e-108	basic leucine zipper 6 isoform X1
Swissprot	Q5JMK6	1e-109	BZP06_ORYSJ; Basic leucine zipper 6
TrEMBL	A0A0E0JNV1	0.0	A0A0E0JNV1_ORYPU; Uncharacterized protein
STRING	OPUNC01G30390.1	0.0	(Oryza punctata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1322	38	125

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58120.1	3e-26	bZIP family protein

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]