 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OPUNC01G29830.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
WRKY |
| Protein Properties |
Length: 258aa MW: 28072.5 Da PI: 7.0994 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC01G29830.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 103.4 | 1.2e-32 | 179 | 237 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK vk+s++prsYYrCt+++C+vkk+v+r a+d+++v++tYeg Hnh+
OPUNC01G29830.1 179 LDDGYRWRKYGQKAVKNSKHPRSYYRCTHHTCNVKKQVQRLAKDTSIVVTTYEGVHNHP 237
59********************************************************8 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 258 aa
Download sequence Send
to blast |
MENLQLQGDD HDDEAHAATA LPDHFPYFAV PPPPPLAVAP AASATSDDQQ HVPLEALEAP 60
PCNHRPGSLV DGPQLAAATT AVPMMLPAMT SLDWQSLLQT CLQVPPPVLE QQQAAAAADQ 120
YSGGNDHGNM QVAESSGDGA GNKEKQVMAK GGAGRSSGTK KKASRPRFAF QTRSDNDILD 180
DGYRWRKYGQ KAVKNSKHPR SYYRCTHHTC NVKKQVQRLA KDTSIVVTTY EGVHNHPCEK 240
LMEALTPILK QLQFLSQF
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK108909 | 0.0 | AK108909.1 Oryza sativa Japonica Group cDNA clone:002-152-G06, full insert sequence. |
| GenBank | AY341845 | 0.0 | AY341845.1 Oryza sativa (japonica cultivar-group) WRKY4 mRNA, complete cds. |
| GenBank | AY870607 | 0.0 | AY870607.1 Oryza sativa (japonica cultivar-group) WRKY23 mRNA, complete cds. |
