 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OPUNC01G29620.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
WRKY |
| Protein Properties |
Length: 317aa MW: 33017.7 Da PI: 4.6522 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC01G29620.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 96.1 | 2.3e-30 | 95 | 153 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D ++WrKYGqK++kgs+fpr+YYrC+s+ gCp++k+vers+ dp++v++tY+ eHnh+
OPUNC01G29620.1 95 TDSWAWRKYGQKPIKGSPFPRAYYRCSSSkGCPARKQVERSRADPDTVIVTYSFEHNHS 153
69*************************998****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 317 aa
Download sequence Send
to blast |
MDGEWSDGAV SSPTMSGGGG EQTKAGEGVV DVAAADCLES PVSPSPAAGQ RSGAGAAASP 60
SGRPRRSAQK RVVTVPLADV TGPRPKGVGE GNTPTDSWAW RKYGQKPIKG SPFPRAYYRC 120
SSSKGCPARK QVERSRADPD TVIVTYSFEH NHSATVPRAQ NRQAAPQKPK AQACSPLEPV 180
VEPEETHLAG VTAGPVSGSD GMAAIEVRDE FRWLYDVVSV TTSLTSPSDI DAADEMQLYD 240
QPMFFGGAAV GTAALLPDEF GDVGGLGGEG LGEEEAMFEG LGELPECAMV FRRRAGDRLA 300
MGGGVKIEQS AESTAMT
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK109770 | 0.0 | AK109770.1 Oryza sativa Japonica Group cDNA clone:002-147-A06, full insert sequence. |
| GenBank | AY870603 | 0.0 | AY870603.1 Oryza sativa (japonica cultivar-group) WRKY14 mRNA, complete cds. |
