 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OPUNC01G21030.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
WRKY |
| Protein Properties |
Length: 311aa MW: 32769.6 Da PI: 9.0371 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC01G21030.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 92.2 | 4e-29 | 152 | 211 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
++Dg++WrKYGqK+ kg++ pr+YYrCt a gCpvkk+v+r+++d++++++tY g Hnh+
OPUNC01G21030.1 152 VKDGCQWRKYGQKTAKGNPWPRGYYRCTGApGCPVKKQVQRCNHDTSILITTYDGVHNHP 211
58**************************999****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 311 aa
Download sequence Send
to blast |
MNTFAFFRDE VQKASEKVQR HHANDDEAGL FLSLGLSLGS SPDAGHASKK DEADAGNGGG 60
DLVGAAGADG YLALALRCDH AAGKPMVHPK RQKATTNSSS SSSSICGEYG DGGGAAAVTA 120
GDDDRPCMIT DASTANRPGR VVLRTRCSAP TVKDGCQWRK YGQKTAKGNP WPRGYYRCTG 180
APGCPVKKQV QRCNHDTSIL ITTYDGVHNH PITPYAAALP SSSSAVAMLT SSSTLSQLQR 240
VMSRRIAMPT AQSSSSWSQK NYPIEADVVA KAVWDPKFQA TVVAAVASYV REQSVASGKG 300
AGERFNLAPP Y
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP003300 | 2e-81 | AP003300.4 Oryza sativa Japonica Group genomic DNA, chromosome 1, PAC clone:P0700A11. |
| GenBank | AP003492 | 2e-81 | AP003492.2 Oryza sativa Japonica Group genomic DNA, chromosome 1, PAC clone:P0712E02. |
| GenBank | AP014957 | 2e-81 | AP014957.1 Oryza sativa Japonica Group DNA, chromosome 1, cultivar: Nipponbare, complete sequence. |
