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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC01G16830.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
NAC |
Protein Properties |
Length: 227aa MW: 25078.6 Da PI: 6.4011 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC01G16830.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 30.3 | 1.2e-09 | 24 | 162 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleev..ikev.diykvePwdLpk....kvkaeek.ewyfFskrdkkyatgkrknr.atksgyWk..a 85
Gf+ Pt +elv ++L+++++g +++ ++ i d + P dL + +++ + + e ++F++r++ ++ + r++ + g Wk
OPUNC01G16830.1 24 TGFQDAPTVDELVLRHLRPRLRGFHCPDGDApvIGVRdDPAAAAPLDLVArhggAADRR-RgEAFYFVRRRRCHRLSVRRTVgGGAGGQWKhsW 116
699999*******************77755442544469*********74334322223.25889999999987754444433455899**555 PP
NAM 86 tgkdkevlskkgelvglkktLvfy...kgrapkgektdWvmheyrl 128
tg+ k+v++ + + + fy +g + ++ Wv+ ey++
OPUNC01G16830.1 117 TGSGKSVTELGVVVPWREACYCFYrrdEGGRLSTFGGGWVLAEYEI 162
999*****955555556667889943333344444678******86 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 227 aa
Download sequence Send
to blast |
MGDDPPDDAG EASDLSSSSH SGATGFQDAP TVDELVLRHL RPRLRGFHCP DGDAPVIGVR 60 DDPAAAAPLD LVARHGGAAD RRRGEAFYFV RRRRCHRLSV RRTVGGGAGG QWKHSWTGSG 120 KSVTELGVVV PWREACYCFY RRDEGGRLST FGGGWVLAEY EITEPSTYRR ADEEEDDDEY 180 WVLCHVRKTA SKKRKRNRRD EAVAAWVVAG MESESESESY TGISYAG
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP002968 | 0.0 | AP002968.2 Oryza sativa Japonica Group genomic DNA, chromosome 1, PAC clone:P0416G11. |
GenBank | AP014957 | 0.0 | AP014957.1 Oryza sativa Japonica Group DNA, chromosome 1, cultivar: Nipponbare, complete sequence. |