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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC01G09340.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
GeBP |
Protein Properties |
Length: 401aa MW: 42546.4 Da PI: 4.8225 |
Description |
GeBP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC01G09340.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF573 | 96.1 | 3.5e-30 | 80 | 180 | 2 | 96 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk...aksgkepsfskehdqkif 89
lfqrlw++e e+++L+G++df++++g+ +++ d+ fy+ +++++sf+++k+ql+eK+rrLKkK++ + ++ +++g ++f+++h+ i+
OPUNC01G09340.1 80 LFQRLWTDEEELLILRGFLDFTTRRGTtfASHQyDTGPFYDEIRRRLSFDFTKNQLIEKLRRLKKKYRLCAARmaaSSQGGGFAFRSAHEAAIY 173
79************************99877778**********************************99999777789999************ PP
DUF573 90 elskkiW 96
+l++ iW
OPUNC01G09340.1 174 DLARHIW 180
******* PP
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Sequence ? help Back to Top |
Protein Sequence Length: 401 aa
Download sequence Send
to blast |
MADDEPTAAA AASHSSPSSS PADEDDEEGT NSDGSNPDHD AAPHHPPPHP PEPTGAIPPP 60 PPPSPPPPPP GAGAEDSRRL FQRLWTDEEE LLILRGFLDF TTRRGTTFAS HQYDTGPFYD 120 EIRRRLSFDF TKNQLIEKLR RLKKKYRLCA ARMAASSQGG GFAFRSAHEA AIYDLARHIW 180 PPALKRDGTA SDEDDINPAA AAATATAAVT TPGAMEDGFS GSATAPASTP TPTPRGRGGR 240 RVRRRMAHEQ ETPALPSTPA LISTDGANQE PLVAAMENSI PLIAQLPPVS ETAQIPVTAN 300 GANEEAVRSI LSPLLKEFIS SFAVAGQTGP GMGLNMGFGG AGLNADIAGL GFGIAGLNPG 360 VPDVDKWRQQ QILELEVYLK RIELVREQVT AALDELRSSE G
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CP012609 | 0.0 | CP012609.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 1 sequence. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT3G04930.2 | 1e-24 | DNA-binding storekeeper protein-related transcriptional regulator |