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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC01G06210.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 247aa MW: 26241.3 Da PI: 6.0891 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC01G06210.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 53 | 8.6e-17 | 58 | 106 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr + +g+Wv+eIr+p++ + r++lg+f +e+Aa+a++ a+++++g
OPUNC01G06210.1 58 YRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFPCPEMAARAHDVAALSIKG 106
9****998.**********843...6***********************9987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 247 aa
Download sequence Send
to blast |
MAASEQSSES SSTASYSSCS PASTSSCGGG GGAKKQEVGK RKREDGGGGV AGEQAVAYRG 60 VRMRAWGKWV SEIREPRKKS RIWLGTFPCP EMAARAHDVA ALSIKGARAV LNFPDLAPAL 120 PRPASLAPRD VQAAAALAAV MHHHKHPVPT SSTSTSTSTT TTISSPLVPP PADEHPAARD 180 EPQHPEPSRE NEQTPPPAAQ MAVAELVFDE LAPLWVEDVV EFGPSDHCWT AYDALDPIGF 240 QPLLWEY
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK108873 | 1e-131 | AK108873.1 Oryza sativa Japonica Group cDNA clone:002-152-C11, full insert sequence. |
GenBank | AP003197 | 1e-131 | AP003197.4 Oryza sativa Japonica Group genomic DNA, chromosome 1, BAC clone:B1015E06. |
GenBank | AP014957 | 1e-131 | AP014957.1 Oryza sativa Japonica Group DNA, chromosome 1, cultivar: Nipponbare, complete sequence. |
GenBank | AY339374 | 1e-131 | AY339374.1 Oryza sativa (japonica cultivar-group) Ap21 mRNA, complete cds. |