 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
OPUNC01G05680.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
Family |
NAC |
Protein Properties |
Length: 482aa MW: 54153.8 Da PI: 7.9771 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC01G05680.1 | genome | OGE | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 113.7 | 2e-35 | 95 | 237 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........t 78
lp+G++F+Ptd+el+ e+L++kv+++ ++++ i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+
OPUNC01G05680.1 95 LPAGVKFDPTDQELI-EHLEAKVREEGsrshplIDEFIPtIEGEdGICYTHPEKLP-GVTRDGLSKHFFHRPSKAYTTGTRKRRKiqtecdvqK 186
799************.99******9996775553333333666646**********.555666799******************7566666443 PP
NAM 79 ksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
+ +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l
OPUNC01G05680.1 187 GETRWHKTGKTRPVMV-NGRQKGCKKILVLYtnFGKHRKPEKTNWVMHQYHL 237
3778************.999***********5547999999*********98 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 482 aa
Download sequence Send
to blast |
MYTSPTLLAF SFALLLLLLL YYLSSLLYSQ LGTRRRPTHA CARSLPDAYE SSMNRGHISS 60 SELIDAKLEE RRISTAKHCP SCGNKLDCKP DWVGLPAGVK FDPTDQELIE HLEAKVREEG 120 SRSHPLIDEF IPTIEGEDGI CYTHPEKLPG VTRDGLSKHF FHRPSKAYTT GTRKRRKIQT 180 ECDVQKGETR WHKTGKTRPV MVNGRQKGCK KILVLYTNFG KHRKPEKTNW VMHQYHLGDL 240 EEEKEGELVV CKIFYQTQPR QCSWSSDRGG ATAAASAVTT TVQQEQRRRD SGSGSCSSTR 300 DHEVSATSYS TGYAVAAAVE MQHLKHAADH FSFAPFRKSF EEVGISGDQV HSNQLGRSEQ 360 QHAGQEQQPH RPLLATTTAV PATAFLISRP TNPVSNIVPP AMQHASVVLD HDQFHVPAIL 420 LHHDKFQQQQ QQKLDRRSAG LEELIMGCTS SSTKGEASIP HSQETEWPYQ PYWTPDNQDH 480 HG
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcription activator involved in xylem formation (PubMed:25265867, PubMed:25535195). Promotes the expression of the secondary wall-associated transcription factor MYB46 (PubMed:25265867). Functions upstream of NAC030/VND7, a master switch of xylem vessel differentiation (PubMed:25265867, PubMed:25535195). Acts as upstream regulator of NAC101/VND6 and LBD30/ASL19 (PubMed:25535195). {ECO:0000269|PubMed:25265867, ECO:0000269|PubMed:25535195}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | EU541472 | 0.0 | EU541472.1 Oryza sativa Japonica Group cultivar Dongjin NAC-type transcription factor (NAC075) mRNA, complete cds. |