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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC01G04820.1 |
Organism |
|
Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
BES1 |
Protein Properties |
Length: 137aa MW: 15213 Da PI: 10.6483 |
Description |
BES1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC01G04820.1 | genome | OGE | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF822 | 112.2 | 8.2e-35 | 15 | 126 | 5 | 112 |
DUF822 5 rkptwkEr..EnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.eeaeaagssasaspesslq 95
rk+ ++ r + + R RrRR +a++iyaGLRa ++y lpk+aD+n+Vl+ALc+eAG++v+dDG++ r+++++l + + +g s+++ + ss++
OPUNC01G04820.1 15 RKRAARRRwwQRRRGRRRRRRGVATRIYAGLRAGAGYTLPKHADQNDVLRALCAEAGYLVDDDGNVSRRHDERLaGAGAGGGGSSDQLQVSSYS 108
5555555511345556778899****************************************************999999************** PP
DUF822 96 .sslkssalaspvesysa 112
+ + a++ + ++++
OPUNC01G04820.1 109 gATEAAVAIQHQEQEQEI 126
777777777777666655 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 137 aa
Download sequence Send
to blast |
MEGAVPMGQQ LARERKRAAR RRWWQRRRGR RRRRRGVATR IYAGLRAGAG YTLPKHADQN 60 DVLRALCAEA GYLVDDDGNV SRRHDERLAG AGAGGGGSSD QLQVSSYSGA TEAAVAIQHQ 120 EQEQEISLEL TLSFTYM
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5zd4_A | 4e-13 | 36 | 94 | 391 | 449 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 4e-13 | 36 | 94 | 391 | 449 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 4e-13 | 36 | 94 | 391 | 449 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 4e-13 | 36 | 94 | 391 | 449 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
Search in ModeBase |
Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 19 | 34 | RRRWWQRRRGRRRRRR |
2 | 24 | 30 | QRRRGRR |
3 | 26 | 33 | RRGRRRRR |
4 | 26 | 34 | RRGRRRRRR |
5 | 27 | 34 | RGRRRRRR |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP002523 | 1e-77 | AP002523.1 Oryza sativa Japonica Group genomic DNA, chromosome 1, PAC clone:P0013F10. |
GenBank | AP014957 | 1e-77 | AP014957.1 Oryza sativa Japonica Group DNA, chromosome 1, cultivar: Nipponbare, complete sequence. |