 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OPUNC01G03310.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
MYB_related |
| Protein Properties |
Length: 302aa MW: 33447.9 Da PI: 6.4213 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC01G03310.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 56 | 8.9e-18 | 36 | 80 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
r rW++eE+e+++da ++G + Wk+I +++g ++t q++s+ qky
OPUNC01G03310.1 36 RERWSEEEHERFLDALIMYGRD-WKKIEEHVG-TKTTIQIRSHAQKY 80
78******************77.*********.*************9 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 302 aa
Download sequence Send
to blast |
MGVGLMDRNT NNSSSSSSSE MPGKKARKPY TITKPRERWS EEEHERFLDA LIMYGRDWKK 60
IEEHVGTKTT IQIRSHAQKY FLKVQKMGLA AGLPPQYPRR RLVMQQQQSS PAVSSSVAAT 120
AILHGQPQCL PPLGMPHHKV AVQSSIGWDC PGNLDWASTS GTAAWGNHDG LIQPAAAFDS 180
FPGESSFMGA ASFSNMSMDW TGSTSEMATA SIVQDETIEL PISPDDLQFA QVYKFIGDMF 240
DPDSPCPVET HLQKLKNMDD ITVKTILLVL RNLEDNLLSP QFEPIRRLLS TYDPNQGLSG 300
HL
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK106969 | 0.0 | AK106969.1 Oryza sativa Japonica Group cDNA clone:002-119-G02, full insert sequence. |
