PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA12G03070.1
Organism
Oryza nivara
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 194aa    MW: 21246 Da    PI: 8.2424
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA12G03070.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.81.5e-10116178163
                      XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      eke kr rr   NRe+Ar   +R++a  +eL++kv+ L+++N+++kke e+  +e+ +lk  +
  ONIVA12G03070.1 116 EKEAKRLRRVLANRESARQTILRRQAIRDELARKVADLSTQNESMKKERETVMQEYLSLKETN 178
                      89**********************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.3E-6113181No hitNo description
SMARTSM003381.9E-12116180IPR004827Basic-leucine zipper domain
PfamPF001707.7E-10116179IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.14118181IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.19E-7120176No hitNo description
CDDcd147022.80E-10121171No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    Send to blast
MSDDHSGGRG EQRQCRRGFA VDVVELGAAL ALADMAGAAV KPAMQLQLQP TAAQEEDEEM  60
ATTRLSLQLG NNVGSIIQSS SCSSSGSSAG LPAPPPPPPP ATAYGTKPRH MLTEEEKEAK  120
RLRRVLANRE SARQTILRRQ AIRDELARKV ADLSTQNESM KKERETVMQE YLSLKETNKQ  180
LKEQAQHHLS LSLF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankOSU042970.0U04297.1 Oryza sativa Nipponbare bZIP DNA-binding factor (osZIP-2b) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025877668.11e-101uncharacterized protein LOC4351546
TrEMBLA0A0E0J6Y51e-139A0A0E0J6Y5_ORYNI; Uncharacterized protein
STRINGONIVA12G03070.11e-139(Oryza nivara)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31653475
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.15e-16bZIP family protein