 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
ONIVA11G01230.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
WRKY |
| Protein Properties |
Length: 280aa MW: 31661.6 Da PI: 6.2248 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| ONIVA11G01230.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 58.8 | 1e-18 | 122 | 186 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSST....TEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedp....kvveitYegeHnhe 59
+Dg++WrKYGqK + ++++rsYYrC+ + gCp++k v++ ++ + k++++ Y g+H+++
ONIVA11G01230.1 122 NDGHQWRKYGQKWISRAKHSRSYYRCANSkvqGCPATKTVQQMDSSGngtsKLFNVDYYGQHTCR 186
8*************************9887889********99876522226899*******995 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 280 aa
Download sequence Send
to blast |
MKILESFGHS DCQVVINMIE HQKALMVELR GMVMPLLPSD NEQAKLALQL LGDILSCSDK 60
AISMLELGGD TKKLTNLVGG KRKGDKHSMD NHNLEEEAKE SVSKRRKNAE HTGSTVAQAP 120
HNDGHQWRKY GQKWISRAKH SRSYYRCANS KVQGCPATKT VQQMDSSGNG TSKLFNVDYY 180
GQHTCRGDGI ADPYVVDTAH HSMEPINQNE CNSPTLEHEA HEVQDERFEN LCMVQNMPEY 240
LIDFELERAF EFIVNSPLGS EHWTFDDSIR CEHSPICIWG
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AY781112 | 0.0 | AY781112.1 Oryza sativa (indica cultivar-group) WRKY DNA-binding protein (WRKY89) mRNA, complete cds. |
