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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ONIVA10G08250.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 320aa MW: 33993.1 Da PI: 5.2297 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ONIVA10G08250.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 61.6 | 1.8e-19 | 116 | 166 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
+++GVr ++ +g+W+AeIrdp+ r r++lg+f tae Aa+a++aa+++l+g+
ONIVA10G08250.1 116 RFRGVRKRP-WGKWAAEIRDPV----RgVRVWLGTFPTAESAARAYDAAARRLRGA 166
69*******.**********63....56**************************95 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 320 aa
Download sequence Send
to blast |
MSQTQSNSNQ THLPTPNPSR ARAMCGGAIL ADLIPSPRSG GHTKKNKRRR ISDDEDFEAA 60 FEEFDAGDDD SDSDSESEEV DEYDVVVDDD DSEDGVVVLP PPPPPVIPHE RHGARRFRGV 120 RKRPWGKWAA EIRDPVRGVR VWLGTFPTAE SAARAYDAAA RRLRGAKAKP NFPSAPPPSA 180 AAHRRKKRRA HAATRSPSSP PATSEVTAAS ASASSDVPAP AFASFVGEPG HGGAKSMPTT 240 SHTSQPAPPA TVASENVDDP EVFDPYDVHG GLASYFAGGA YESLESLFAH GGDSAAVDQA 300 ASDHWPAALW SFADDGSFCF
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK110269 | 0.0 | AK110269.1 Oryza sativa Japonica Group cDNA clone:002-163-C07, full insert sequence. |