PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA07G26520.1
Organism
Oryza nivara
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 277aa    MW: 29517.2 Da    PI: 9.4298
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA07G26520.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.24.9e-15186228547
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                      +r++r++kNRe+A rsR+RK+a++ eLe+k+  Le+eN++L++
  ONIVA07G26520.1 186 RRQKRMIKNRESAARSRARKQAYTNELENKISRLEEENQRLRE 228
                      79***************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.9E-15179228No hitNo description
SMARTSM003381.0E-14182251IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.335184228IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.56E-11186229No hitNo description
PfamPF001703.3E-12186228IPR004827Basic-leucine zipper domain
CDDcd147071.83E-22186227No hitNo description
PROSITE patternPS000360189204IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    Send to blast
MGVHAMSCHG GGGGGGGGGG EGALSRQGSV YSLTLNEVES HLGEPLRSMN LDDLLRTVLP  60
AAAAAAETAG RKTVDEVWRD IQGASTGRHH ATPMGEMTLE DFLSRAGVAV DGAASAAGAH  120
WLRGHYPPPP PPPTTLQYVG GSGAVVDGVY NRVDGHGVAG FLSQVGVAGR KRGGGVDGVV  180
EKTVERRQKR MIKNRESAAR SRARKQAYTN ELENKISRLE EENQRLREHK AVADFSTFPS  240
CVDFLKAFLT QKLEPVMQIV PQPEPKQQLR RTTSASF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1109150.0AK110915.1 Oryza sativa Japonica Group cDNA clone:002-173-C06, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015645810.11e-177ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBLA0A0E0I5V30.0A0A0E0I5V3_ORYNI; Uncharacterized protein
STRINGONIVA07G26520.10.0(Oryza nivara)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44413367
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41070.31e-44bZIP family protein