|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
ONIVA07G23260.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
Family |
GeBP |
Protein Properties |
Length: 326aa MW: 35587.4 Da PI: 9.6959 |
Description |
GeBP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ONIVA07G23260.1 | genome | OGE | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF573 | 107.8 | 7.9e-34 | 29 | 128 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifel 91
lfqrlw+eeDeiv+L+G+ +f+a +g+ +++ d+d fye +++++++ +sksqlveK+rrLK+K++++v++ + sg+ +sf+++h+q ife+
ONIVA07G23260.1 29 LFQRLWTEEDEIVILRGFAEFTAARGTafASHQyDTDPFYEDMRGRLQLGFSKSQLVEKLRRLKRKYRNCVSRlRGSGSAFSFRSPHEQAIFEI 122
79************************99877778***************************************8889***************** PP
DUF573 92 skkiWg 97
++ iW+
ONIVA07G23260.1 123 ARNIWR 128
*****8 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 326 aa
Download sequence Send
to blast |
MATPAAAGGG SGSVGGVGSS SGGGERRPLF QRLWTEEDEI VILRGFAEFT AARGTAFASH 60 QYDTDPFYED MRGRLQLGFS KSQLVEKLRR LKRKYRNCVS RLRGSGSAFS FRSPHEQAIF 120 EIARNIWRPT NKHGRDGDSD DEDATQVTPA PVPVNTSPNG EVKSPTSGRQ RRRRRGGDFA 180 ATAPAAAPAT TNMVQPIQPV QVPVSVPVKM DDTLPALSQT TMPITVTMEG SEPLRLPVMP 240 PQPAVLDADK SCLTPLFKEM VRAVINIGSN PFGAQLSEPP HGLPMEGEKW RKQRILELEV 300 YLKRIELLQD QVKATLEELK SSAPGT
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | CP012615 | 0.0 | CP012615.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 7 sequence. |
Best hit in Arabidopsis thaliana ? help
Back to Top |
Hit ID |
E-value |
Description |
AT3G04930.2 | 4e-35 | DNA-binding storekeeper protein-related transcriptional regulator |