PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA07G22930.1
Organism
Oryza nivara
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 361aa    MW: 37295.6 Da    PI: 8.2179
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA07G22930.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_126.61.3e-08124171148
                      XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                      eke kr rr   NRe+Ar   +R++a  +eL++kv+ L+++N+++kk 
  ONIVA07G22930.1 124 EKEAKRLRRVLANRESARQTILRRQAIRDELARKVADLSSQNETMKKV 171
                      89*******************************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.6E-5122170No hitNo description
SMARTSM003385.5E-7124187IPR004827Basic-leucine zipper domain
PfamPF001701.9E-7124171IPR004827Basic-leucine zipper domain
CDDcd147021.80E-11129170No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    Send to blast
MSDHSSSDGQ RQCRRRGVGV DVELDAAMAL ADMAGAAPGQ PEASPPPHAT QEAAAAAVAK  60
GEQEDEAEMA STRLSLELGK VGIQSSSPCS SSSSAGHPAM QPAAAATAAP GYGPRPRHML  120
TEAEKEAKRL RRVLANRESA RQTILRRQAI RDELARKVAD LSSQNETMKK VAIRTIKKAA  180
VAPPTTATPP STAPQPSFLY TAAPAGVAPV PYVWGSWPPC GPTGYEHGNP GGAAAAAPPL  240
RLPPCAWYYP VVADPRVSSP PTSTYPQPYQ EQPTSSPGGG TAEEDTDDDP CSLTLAIDVD  300
KRSAPGAGGS AAGAGQHASI SDREKATAAA EARKRRKELT KLKQMHGGGG GSRPGGGGEH  360
W
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1332337RKRRKE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126190.0CP012619.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 11 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015615785.11e-170uncharacterized protein LOC4349815
TrEMBLA0A0E0I4G90.0A0A0E0I4G9_ORYNI; Uncharacterized protein
STRINGONIVA07G22930.10.0(Oryza nivara)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31653475
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.14e-09bZIP family protein