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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ONIVA07G13710.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
MYB |
Protein Properties |
Length: 369aa MW: 37834.5 Da PI: 6.8576 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ONIVA07G13710.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 52.4 | 1.2e-16 | 13 | 56 | 1 | 44 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44
rg W++eEde+lv+++ ++G +W++++++ g+ R++k+c++rw
ONIVA07G13710.1 13 RGLWSPEEDEKLVRYISEHGHSCWSSVPKHAGLQRCGKSCRLRW 56
788***************************************** PP
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2 | Myb_DNA-binding | 25.9 | 2.3e-08 | 55 | 77 | 23 | 46 |
-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqk 46
+W+ Ia++++ gRt++++k++w++
ONIVA07G13710.1 55 RWAQIAKHLP-GRTDNEVKNFWNS 77
4*********.***********96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 369 aa
Download sequence Send
to blast |
MGHHCCSKQK VKRGLWSPEE DEKLVRYISE HGHSCWSSVP KHAGLQRCGK SCRLRWAQIA 60 KHLPGRTDNE VKNFWNSCIK KKLIAQGLDP KTHNLLPASK TLLHGGGGGG AANPSGNGLA 120 QFQSNNGAAA AGTTPFTISS PAKAAAYDVA PPALYDVVLP ANPAGGMLMA HDHHHHHQVA 180 AAAAPVGYPY ADHGGNGGGV LMSFRDQNAG VHGAASMDFM NGSSSSSSME QLGGGGGMSS 240 NGNGSFSASM AAFMDEEAAM WATAVAPPGM GGLAGMDQVA QQQKQQQVLV QDAAVGVAPT 300 TLMMHGGGAA TAGAMVVDKS VEMVDVSSAV YGGATATAFD LDLMVESCGM FCGGSGGAGN 360 AMEQLQWDC
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CP012615 | 0.0 | CP012615.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 7 sequence. |