PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA07G05320.1
Organism
Oryza nivara
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 328aa    MW: 34334.8 Da    PI: 7.3231
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA07G05320.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_178.48.6e-25205267163
                      XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      e+elkrerrkq+NRe+ArrsR+RK++e+eeL++kv+eL++eN+aL++el++lkk ++ +++e+
  ONIVA07G05320.1 205 ERELKRERRKQSNRESARRSRLRKQQECEELARKVAELTTENSALRSELDQLKKACEDMEAEN 267
                      89*********************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF165963.6E-869182No hitNo description
Gene3DG3DSA:1.20.5.1707.9E-18204264No hitNo description
SMARTSM003383.4E-22205269IPR004827Basic-leucine zipper domain
PfamPF001703.6E-22205267IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.553207270IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.5E-12208263No hitNo description
CDDcd147029.35E-22210260No hitNo description
PROSITE patternPS000360212227IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    Send to blast
MQHLMAAAAA GAPYGAPVPF PMYHPGAAAA YYAHASMAAG VPYPTAEAMA AAAGAVPEGK  60
GKGKGAAASP EKGSSGAPSG DDASRSGDSG SEESSDTRDD DTDHKDSSAP KKRKSGNTSA  120
EGEPSQATLV PYAAVESPYP LKGRSASKLP VSAPGRAALP NATPNLNIGI DLWNTPPALA  180
VPAGQGEASP GLALARRDGV AHLDERELKR ERRKQSNRES ARRSRLRKQQ ECEELARKVA  240
ELTTENSALR SELDQLKKAC EDMEAENTRL MGDKAQYKGP TVTTTLGMSI DSSKTQHHDD  300
EGQLHKNTNN NSNGNYVGGS HKPEANSR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1221227RRSRLRK
2221228RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtInteracts specifically with the 8-bp sequence 5'-CACGTGGC-3'in the abscisic acid response element (ABARE). Also binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2891790.0AK289179.1 Oryza sativa Japonica Group cDNA, clone: J100028J17, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015644731.11e-170DNA-binding protein EMBP-1
SwissprotP250328e-59EMBP1_WHEAT; DNA-binding protein EMBP-1
TrEMBLA0A0E0HXX40.0A0A0E0HXX4_ORYNI; Uncharacterized protein
STRINGONIVA07G05320.10.0(Oryza nivara)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21603692
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-23basic region/leucine zipper transcription factor 16