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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA06G24780.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 440aa MW: 48204.8 Da PI: 8.7448 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 38.4 | 2.6e-12 | 138 | 166 | 5 | 33 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLee 33 k rr+++NReAAr+sR+RKka+i++Le+ ONIVA06G24780.2 138 KTLRRLAQNREAARKSRLRKKAYIQQLET 166 7789***********************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.2E-5 | 134 | 206 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.4E-9 | 134 | 178 | No hit | No description |
PROSITE profile | PS50217 | 8.565 | 136 | 165 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.44E-7 | 138 | 168 | No hit | No description |
Pfam | PF00170 | 2.4E-9 | 138 | 166 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 141 | 156 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 1.1E-25 | 215 | 289 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 440 aa Download sequence Send to blast |
MFRKVGQPES FSASHGYDMP SDLDQALLLY FDGQEQDKPS TQEEPHKPLN FVKETLNIFP 60 SQPMDGEPTP TPKASMSAPP IAGFSRRSPA PAAADGRPLT LGKTSKAAFK KEGGSGSGGA 120 MAASASSELM GPKTPDPKTL RRLAQNREAA RKSRLRKKAY IQQLETGRIR LAHLEQEIQF 180 TRAQGAFCGA GILSPDAALF NLEYERWQEA HHQVISRLRA AVEEHRPDGE LQPHVDEAMS 240 HYGVLMAHKA RLVGADPLHL LSGLWKGAVE QCFLWIGGFR PSELIKVVVR HVEPLTEQQL 300 AAVYSAQQAA RQEEDALDGG LQALLRSLSD VVSSSDAPSS SQQTPPVMYH PSAAAAMAAA 360 SFMGQYGSYS NLQLAMDKLA NLAIFLRQAD EERMRTLHAL RRMLTVRQAA RCFVAVDDYF 420 GRLRALALFW TTTRPHPAAG |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK119909 | 0.0 | AK119909.1 Oryza sativa Japonica Group cDNA clone:002-183-A10, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015644001.1 | 0.0 | transcription factor TGAL8 isoform X2 | ||||
Swissprot | Q69T21 | 0.0 | TGAL8_ORYSJ; Transcription factor TGAL8 | ||||
TrEMBL | A0A0E0HTG8 | 0.0 | A0A0E0HTG8_ORYNI; Uncharacterized protein | ||||
STRING | ONIVA06G24780.1 | 0.0 | (Oryza nivara) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06839.3 | 1e-93 | bZIP family protein |
Publications ? help Back to Top | |||
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