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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ONIVA06G07220.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 189aa MW: 20988.4 Da PI: 6.6792 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ONIVA06G07220.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 54.5 | 2.9e-17 | 47 | 96 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr + +g+WvAeIr p++ rkr++l +++++e+Aa+a +aa +l+g
ONIVA06G07220.1 47 KYRGVRLRQ-WGKWVAEIRLPNS---RKRIWLRSYDSPEKAARAFDAAFICLRG 96
8*****998.**********933...5*********************999998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0001944 | Biological Process | vasculature development |
GO:0002213 | Biological Process | defense response to insect |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009611 | Biological Process | response to wounding |
GO:0051301 | Biological Process | cell division |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 189 aa
Download sequence Send
to blast |
MDQTALEHMA TNLASHLRAR GSHICEPSSY APIKRANGTS PAPVERKYRG VRLRQWGKWV 60 AEIRLPNSRK RIWLRSYDSP EKAARAFDAA FICLRGGEAI AGLNFPESPP TVVARTSDPR 120 EVLAYATSHA NRLSSDATIA QEEAALVAGG SFDWSQLPLY SPMTTPTAEH WEEDNVEATT 180 SDNLWSFDF
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP006056 | 1e-171 | AP006056.3 Oryza sativa Japonica Group genomic DNA, chromosome 6, BAC clone:B1172G12. |
GenBank | AP014962 | 1e-171 | AP014962.1 Oryza sativa Japonica Group DNA, chromosome 6, cultivar: Nipponbare, complete sequence. |
GenBank | CP012614 | 1e-171 | CP012614.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 6 sequence. |