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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ONIVA05G19090.2 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
MYB |
Protein Properties |
Length: 171aa MW: 19225.5 Da PI: 9.9272 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ONIVA05G19090.2 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 23.8 | 1e-07 | 15 | 61 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
+W++ Ed+ + a ++ + +W+ +a++++ gR++ ++ ++++ +
ONIVA05G19090.2 15 PWSKAEDKVFESALVAFPEHthnRWAIVASRLP-GRSAHEVWEHYRVL 61
8***************9999999**********.***********976 PP
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2 | Myb_DNA-binding | 45.4 | 1.8e-14 | 103 | 147 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+WT+eE+ l++++ +++G g+W+ I+r k+Rt+ q+ s+ qk+
ONIVA05G19090.2 103 PWTEEEHRLFLEGLEKYGRGDWRNISRWSVKTRTPTQVASHAQKF 147
8******************************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 171 aa
Download sequence Send
to blast |
MAFYLGSMGG SPSRPWSKAE DKVFESALVA FPEHTHNRWA IVASRLPGRS AHEVWEHYRV 60 LVDDVDLIER GMVASPGCWD DGAGRGGAQG ASRGGDERRR GVPWTEEEHR LFLEGLEKYG 120 RGDWRNISRW SVKTRTPTQV ASHAQKFFIR QANAGNRSDS KRKSIHDIIA P
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Functional Description ? help
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Source |
Description |
UniProt | Involved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CP012613 | 1e-163 | CP012613.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 5 sequence. |