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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ONIVA05G17560.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 270aa MW: 28027.2 Da PI: 7.5074 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ONIVA05G17560.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 49.4 | 1.1e-15 | 91 | 136 | 2 | 51 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51
+y+GVr+++ +g+Wv+eIr+p + r r +lg++ tae Aa a++aa
ONIVA05G17560.1 91 RYRGVRRRR-WGKWVSEIRVPGT---RERLWLGSYATAEAAAVAHDAAVC 136
59****777.**********943...5*******************9976 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 270 aa
Download sequence Send
to blast |
MPRSGILYAR VEKVSADLAE PINGGRGGDT THTRRLVLTP PRTNELELRV ISEIVVAVSA 60 NDEQASPEGE DGTYMGRVAA SGGGGGGEMM RYRGVRRRRW GKWVSEIRVP GTRERLWLGS 120 YATAEAAAVA HDAAVCLLRL GGGRRAAAGG GGGLNFPARA LAAAAAASSY GGAGGLLSPR 180 SVQRVASDAG MVADAQLVDL RRDHPPAAAA ASSSGSGVAG DGARKQGTRG EVSDTYWCRN 240 GEDGSRSWSS GSEELIVYEG LSVDDMEILM
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC124836 | 0.0 | AC124836.2 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone OSJNBb0092E21, complete sequence. |
GenBank | AC137623 | 0.0 | AC137623.3 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone P0426G01, complete sequence. |
GenBank | AP014961 | 0.0 | AP014961.1 Oryza sativa Japonica Group DNA, chromosome 5, cultivar: Nipponbare, complete sequence. |