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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ONIVA05G11840.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 278aa MW: 29946.5 Da PI: 10.2 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ONIVA05G11840.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 58 | 2.4e-18 | 94 | 143 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
+++GVr+++ +gr+ AeIrdp + kr +lg+f+taeeAa+ ++ a+++++g
ONIVA05G11840.1 94 RFRGVRRRP-WGRFSAEIRDP-----SlqKRLWLGTFDTAEEAAAVYDDAALRIKG 143
69*******.**********9.....445************************987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 278 aa
Download sequence Send
to blast |
MSPADSLAAG RSRRVGASMP RPKRVRVYFV DADATDTDSS GDERSRPRVR EVIDIDVGAA 60 SPAPAPAPKH PRRLVPTATA ALARRRAGMA ASRRFRGVRR RPWGRFSAEI RDPSLQKRLW 120 LGTFDTAEEA AAVYDDAALR IKGSHAVTNF PSDSDTPSAK AKQMKLHPRR HTTPDKTPSS 180 STAAAAKASV PDPTPAPPEE DRANDSSFNP FASPTSVLRY AAADEVTAPS FEHLLVELGD 240 LSAPPPSTKA AEFDWLPWWE GEDFVTAGLT ASNAVSVK
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 84 | 101 | RRAGMAASRRFRGVRRRP |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CP012613 | 0.0 | CP012613.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 5 sequence. |