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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ONIVA05G01910.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
Trihelix |
Protein Properties |
Length: 330aa MW: 36655.6 Da PI: 6.1586 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ONIVA05G01910.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 63 | 6.7e-20 | 54 | 118 | 1 | 65 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkik 65
+W++ e+ a +++r ++++++ ++k++k+lWe+ s+++++ gf r+p qCk+kw+nl +r+k ++
ONIVA05G01910.1 54 QWSHAETAAFLAIRADLDHSFLSTKRNKALWEAASARLHALGFARTPDQCKSKWKNLVTRFKGTE 118
7*************************************************************986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 330 aa
Download sequence Send
to blast |
MDPFHHLNSS FSNPYHPLLA SPPHHFAPDP LPPPPPPPLL PADPPSLERE RLPQWSHAET 60 AAFLAIRADL DHSFLSTKRN KALWEAASAR LHALGFARTP DQCKSKWKNL VTRFKGTEGA 120 AAVAAAGTDQ MQGGQGGGAA ARGSSSSFPF HDELRRIFDA RVERARALER KKVKGKDPDD 180 DHDGGGDGDE DDEEEADQQV DEEDDGASGD TTRAGSKKRR RKAAAAARRT GSTGGVEGEV 240 EAMLREFMRR QIEMEERWME AAEAREAERR AREEEWRTAM VALGEERLAL VRRWREREDA 300 WRARAEEREE RRHQLVAALL AKLGAGDASA
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC130598 | 0.0 | AC130598.2 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone OSJNBa0056I11, complete sequence. |
GenBank | AP014961 | 0.0 | AP014961.1 Oryza sativa Japonica Group DNA, chromosome 5, cultivar: Nipponbare, complete sequence. |