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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ONIVA05G01120.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
MYB |
Protein Properties |
Length: 286aa MW: 32164.4 Da PI: 7.1025 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ONIVA05G01120.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 44.8 | 2.9e-14 | 57 | 104 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT++Ed +lv v+++G ++W+ a+ g++Rt+k+c++rw +yl
ONIVA05G01120.1 57 KGPWTEQEDVQLVWFVRLFGERRWDFLAKVSGLKRTGKSCRLRWVNYL 104
79********************************************97 PP
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2 | Myb_DNA-binding | 50.8 | 3.8e-16 | 110 | 155 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rgr T++E+ l+++++ q+G++ W++Iar ++ gRt++++k++w++++
ONIVA05G01120.1 110 RGRITADEERLILHLHSQWGSR-WSRIARSLP-GRTDNEIKNFWRTHM 155
899*******************.*********.************986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 286 aa
Download sequence Send
to blast |
MVVKKAATMA EAEAEEEMMM RMMCGSGGNE MMKTKMKKKN REGEEEEEVS GGGRMRKGPW 60 TEQEDVQLVW FVRLFGERRW DFLAKVSGLK RTGKSCRLRW VNYLHPGLKR GRITADEERL 120 ILHLHSQWGS RWSRIARSLP GRTDNEIKNF WRTHMRKIAH HAKKKTNSPS PAPTTSSGSL 180 SSSLTTATTT MATAAALQES SSCGGDDEAV DQLVAAATTP ASQLLTMDYT MDQLWNDIAA 240 AEADTSCYDA AAMASPPSPV WEFCTDYSLW RIDDEEYYKK MLDASQ
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. {ECO:0000305}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC093921 | 0.0 | AC093921.2 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone OSJNBb0041A22, complete sequence. |
GenBank | AC108504 | 0.0 | AC108504.2 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone OJ1654_B10, complete sequence. |
GenBank | AK111634 | 0.0 | AK111634.1 Oryza sativa Japonica Group cDNA clone:J013119H17, full insert sequence. |
GenBank | AP014961 | 0.0 | AP014961.1 Oryza sativa Japonica Group DNA, chromosome 5, cultivar: Nipponbare, complete sequence. |
GenBank | CP012613 | 0.0 | CP012613.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 5 sequence. |