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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ONIVA04G19740.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
MYB |
Protein Properties |
Length: 368aa MW: 39587.4 Da PI: 4.6807 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ONIVA04G19740.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 53.2 | 6.9e-17 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd +lv +++++G +W++ ++ g+ R++k+c++rw +yl
ONIVA04G19740.1 16 KGSWTPEEDMRLVAYIQKYGHANWRALPKQAGLLRCGKSCRLRWINYL 63
799*****************************99************97 PP
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2 | Myb_DNA-binding | 53.1 | 7.5e-17 | 69 | 114 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg++T+eE+e +++++ +lG++ W++Ia++++ gRt++++k+ w+++l
ONIVA04G19740.1 69 RGNFTAEEEETIIKLHGLLGNK-WSKIASCLP-GRTDNEIKNVWNTHL 114
89********************.*********.************986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009751 | Biological Process | response to salicylic acid |
GO:0009753 | Biological Process | response to jasmonic acid |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:2000652 | Biological Process | regulation of secondary cell wall biogenesis |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 368 aa
Download sequence Send
to blast |
MGKGRAPCCA KVGLNKGSWT PEEDMRLVAY IQKYGHANWR ALPKQAGLLR CGKSCRLRWI 60 NYLRPDLKRG NFTAEEEETI IKLHGLLGNK WSKIASCLPG RTDNEIKNVW NTHLKKRVSP 120 EQKKGGGKSK KKTTCTDVLV PSPSPSSSTT TTTNCSSGDS AGEQSNTSKE EEEETDKIEI 180 PMLELDPCCF DFDMLVDPVV PDTYCPAMSA SASASAPTSP CSSTSPSCAR AGVDPLLDLP 240 EIVDLGPELW SIMDGGAGDG CTEAPPPAWS NAAAANATVA TTTSLEEEEG KEWWLEDLEK 300 ELGLWGPTDD YHCHPGPQGQ PGRAGPPPSA VVEDPVSCYF QAGPTAAATW QGHEPSAVIT 360 SNPMDYYV
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that regulates positively genes involved in anthocyanin biosynthesis such as A1. {ECO:0000269|PubMed:7920701}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK111960 | 0.0 | AK111960.1 Oryza sativa Japonica Group cDNA clone:001-031-D02, full insert sequence. |