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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ONIVA04G17660.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 466aa MW: 49732.2 Da PI: 8.9543 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ONIVA04G17660.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60.2 | 4.8e-19 | 214 | 264 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
y+GVr+++ +g+WvAeIr p++ r+r +lg+f+tae+Aa a+++ + kl+ge
ONIVA04G17660.1 214 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAAMAYDREAFKLRGE 264
59******9.**********955...5**************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009651 | Biological Process | response to salt stress |
GO:2000070 | Biological Process | regulation of response to water deprivation |
GO:0005634 | Cellular Component | nucleus |
GO:0005737 | Cellular Component | cytoplasm |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 466 aa
Download sequence Send
to blast |
MDAPSGESGG GGGGGGGRRW KGKGVTPIQP RRQLGTVLED SSAALLRPLK KIGRSPDRLL 60 RSASSLSTSS SAPPSPRSSS ASDAPVRVIS SSPSSPSPPS ARHIFPFAYE ASTTTVGGSP 120 RLHPLSWQQS SMSQPASPQQ QQQQPLQHQQ MISFGASPPC STTQFVVPEN AQQQQMLLRY 180 WSEALNLSPR GGPGGVPPWL YQQLLRVPPP PQKLYRGVRQ RHWGKWVAEI RLPRNRTRLW 240 LGTFDTAEDA AMAYDREAFK LRGENARLNF PDRFLGKGRA GGSGRTSVSS SAAAAASCSS 300 SSPSPPETPD DANTQQQAPQ QREQRDTAGV SMGKKQPQPP APTSRQEGCS GGDAAAPYPA 360 EMLHAPAACG GMWVAPDESW FSTWGPGSSF WDDYDMDSAR GLFLHPRFTG DETSMDHSGT 420 QATVPAVAAT AAGMSMPCDD VPVTSSSSDL PPQGTPQTPT FMWKED
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AL662976 | 0.0 | AL662976.3 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074L08, complete sequence. |
GenBank | AP014960 | 0.0 | AP014960.1 Oryza sativa Japonica Group DNA, chromosome 4, cultivar: Nipponbare, complete sequence. |
GenBank | CP012612 | 0.0 | CP012612.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 4 sequence. |
GenBank | CR855230 | 0.0 | CR855230.1 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0115K01-H0319F09, complete sequence. |