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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ONIVA04G11180.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
GRAS |
Protein Properties |
Length: 504aa MW: 52635 Da PI: 8.7024 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ONIVA04G11180.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 237.1 | 7.8e-73 | 86 | 495 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdg..dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92
lv+lLl+++ a ++gd+++a a+L ++ +as +g dp qR+aa+++ La rla +l a ++ +++ +e++ a+++f+++sP+++
ONIVA04G11180.1 86 LVRLLLSAVAAGEAGDARAAAAALREVDRRASCRGggDPAQRVAACYAAVLAPRLAA---GLRPARSSPAAPAAARAEQFLAYTMFYQASPFYQ 176
6899**************************99998789******************9...44444444444444589999************** PP
GRAS 93 fshltaNqaIleavege..ervHiiDfdisqGlQWpaLlqaLasRpeg...................ppslRiTgvgspesgskeeleetgerL 165
f+h+taNqaI+ea+e+ +r+H++Dfd+s+G+QWp+L+q+L++ ++ p slRiTg+g+ s++el+et+ rL
ONIVA04G11180.1 177 FAHFTANQAIVEAFESGgrRRLHVVDFDVSYGFQWPSLIQSLSDAAAAatsssshddddnrggcgdgPVSLRITGFGA----SADELRETEARL 266
**************9876699*********************988744455677888889999999788*********....9*********** PP
GRAS 166 akfAeel.gvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe.....adhnse.. 251
++fA+ + +++fef+ + ++ ++ + + r++ + +++Vnlv+ + ++ + + ++sl+P +v ++e+ + +
ONIVA04G11180.1 267 RRFAAGCpNLRFEFEG-ILNNGSNTRHDCTRIDDDATVVVNLVFPASSRE---AC----AATRMAYINSLNPSMVFLIEKHdggggL----Tgg 348
***998769*******.6999***********************655553...22....234699**************97555431....133 PP
GRAS 252 .........sFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetle..........kWrerleeaGFkp 326
s+l rf+ l+y++a+fdsl++ lp++s er +Er lgrei ++va ++r rh + +W++++ aG+
ONIVA04G11180.1 349 dntttgrsaSLLPRFAANLRYFAAVFDSLHECLPADSAERLAIERDHLGREIADAVASLDHQHRRRHGGGGgggdhaaaswNWKAAMAGAGLDG 442
455566777*************************************************9999999996533222222233389*********** PP
GRAS 327 vplsekaakqaklllrkvk...sdgyrveeesgslv..lgWkdrpLvsvSaWr 374
v+ls+++++qaklll++ + + g+rv e +g + l W+d +L ++++Wr
ONIVA04G11180.1 443 VKLSSRTVSQAKLLLKMKSgcgGGGFRVVEGDGGMAmsLAWRDMALATATVWR 495
***************9977422455***9998877668**************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 504 aa
Download sequence Send
to blast |
MNLKLSLAID GGGGGDAAAA VAKKSKVVGG GAVVVDGVGS SAICGGDRGS RVRDRMVKKA 60 EEFDHENGMA ATSSDGGGGG GGGMELVRLL LSAVAAGEAG DARAAAAALR EVDRRASCRG 120 GGDPAQRVAA CYAAVLAPRL AAGLRPARSS PAAPAAARAE QFLAYTMFYQ ASPFYQFAHF 180 TANQAIVEAF ESGGRRRLHV VDFDVSYGFQ WPSLIQSLSD AAAAATSSSS HDDDDNRGGC 240 GDGPVSLRIT GFGASADELR ETEARLRRFA AGCPNLRFEF EGILNNGSNT RHDCTRIDDD 300 ATVVVNLVFP ASSREACAAT RMAYINSLNP SMVFLIEKHD GGGGLTGGDN TTTGRSASLL 360 PRFAANLRYF AAVFDSLHEC LPADSAERLA IERDHLGREI ADAVASLDHQ HRRRHGGGGG 420 GGDHAAASWN WKAAMAGAGL DGVKLSSRTV SQAKLLLKMK SGCGGGGFRV VEGDGGMAMS 480 LAWRDMALAT ATVWRRRRRR RRCR
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 494 | 501 | RRRRRRRR |
2 | 495 | 501 | RRRRRRR |
3 | 496 | 503 | RRRRRRCR |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AL606458 | 0.0 | AL606458.5 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084A10, complete sequence. |
GenBank | AP014960 | 0.0 | AP014960.1 Oryza sativa Japonica Group DNA, chromosome 4, cultivar: Nipponbare, complete sequence. |