|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
ONIVA04G00840.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
Family |
MYB |
Protein Properties |
Length: 142aa MW: 16725 Da PI: 9.9985 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ONIVA04G00840.1 | genome | OGE | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 24.9 | 4.7e-08 | 5 | 34 | 19 | 48 |
TTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 19 lGggtWktIartmgkgRtlkqcksrwqkyl 48
+G g+W++ ar+ ++Rt+k+c++rw++yl
ONIVA04G00840.1 5 HGEGRWNALARCAWLKRTGKSCRLRWLNYL 34
9999**********99************97 PP
|
2 | Myb_DNA-binding | 40.4 | 6.7e-13 | 40 | 83 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg++T++E++l+++++ +G++ ++Ia++++ gRt++++k++w++
ONIVA04G00840.1 40 RGNMTAQEQLLILELHGWWGNR-RSKIAQHLP-GRTDNEIKNYWRT 83
89********************.*********.***********96 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 142 aa
Download sequence Send
to blast |
MLDCHGEGRW NALARCAWLK RTGKSCRLRW LNYLRPDVSR GNMTAQEQLL ILELHGWWGN 60 RRSKIAQHLP GRTDNEIKNY WRTRVQKHAK HLNCDVNSQQ FNDLMRYLWM PRLLDRIHRS 120 QSQSHDTDDA DLSAASCITV TA
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Probable transcription factor that may be involved in the jasmonate-dependent defense responses to the rice blast fungus Magnaporthe oryzae. Does not seem to function in the salicylic acid-dependent signaling pathway. {ECO:0000269|PubMed:11310740}. |
Regulation -- Description ? help
Back to Top |
Source |
Description |
UniProt | INDUCTION: Induced by jasmonate (JA), wounding and infection by the fungal pathogen Magnaporthe oryzae. {ECO:0000269|PubMed:11310740}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AK103455 | 1e-178 | AK103455.1 Oryza sativa Japonica Group cDNA clone:J033129J22, full insert sequence. |
GenBank | HQ858821 | 1e-178 | HQ858821.1 Oryza sativa Japonica Group isolate UT1319 MYB transcription factor mRNA, partial cds. |
Publications
? help Back to Top |
- Ahn IP,Kim S,Kang S,Suh SC,Lee YH
Rice Defense Mechanisms Against Cochliobolus miyabeanus and Magnaporthe grisea Are Distinct. Phytopathology, 2005. 95(11): p. 1248-55 [PMID:18943354] - Campos-Soriano L,García-Martínez J,San Segundo B
The arbuscular mycorrhizal symbiosis promotes the systemic induction of regulatory defence-related genes in rice leaves and confers resistance to pathogen infection. Mol. Plant Pathol., 2012. 13(6): p. 579-92 [PMID:22212404] - Yokotani N, et al.
Role of the rice transcription factor JAmyb in abiotic stress response. J. Plant Res., 2013. 126(1): p. 131-9 [PMID:22847900] - Wang D, et al.
Expression analysis of innate immunity related genes in the true/field blast resistance gene-mediated defence response. Biotechnol. Biotechnol. Equip., 2014. 28(6): p. 999-1007 [PMID:26740780] - Fred AK,Kiswara G,Yi G,Kim KM
Screening Rice Cultivars for Resistance to Bacterial Leaf Blight. J. Microbiol. Biotechnol., 2016. 26(5): p. 938-45 [PMID:26869604]
|