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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ONIVA03G40360.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 241aa MW: 25540.1 Da PI: 11.1016 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ONIVA03G40360.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 59.1 | 1e-18 | 81 | 130 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
+++GVr+++ +gr++AeIrdp + +r +lg+f+taeeAa+a++aa +l+g
ONIVA03G40360.1 81 RFRGVRQRP-WGRFAAEIRDP-----HlrRRLWLGTFDTAEEAAAAYDAASVRLRG 130
69*******.**********8.....556**********************99998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 241 aa
Download sequence Send
to blast |
MGTNPSLHEL AAGAAPRGRV VRILVRDADA TDSSSSEDEA VAVAQPRPRR RGKVGGGGGG 60 GGGVKRRVME AGAGEARPTA RFRGVRQRPW GRFAAEIRDP HLRRRLWLGT FDTAEEAAAA 120 YDAASVRLRG SSAATNFASV RCYSLPPELP KPTISPPEAA VRPITLPIGT AKPTLLPRVK 180 EEGESCGGRV KEEASSCEVQ VLAPEPMWTM ISGKRKKRSG CGTRVRAFHA VSARVEEVGG 240 A
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Functional Description ? help
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Source |
Description |
UniProt | Component of the cytokinin signaling pathway involved in cotyledons, leaves, and embryos development. Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:16832061}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC133007 | 0.0 | AC133007.4 Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete sequence. |
GenBank | AC139172 | 0.0 | AC139172.2 Oryza sativa chromosome 3 BAC OSJNBb0042K11 genomic sequence, complete sequence. |
GenBank | AK068252 | 0.0 | AK068252.1 Oryza sativa Japonica Group cDNA clone:J013145D23, full insert sequence. |
GenBank | AP014959 | 0.0 | AP014959.1 Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence. |
GenBank | CP012611 | 0.0 | CP012611.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 3 sequence. |
GenBank | CT829445 | 0.0 | CT829445.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA045M03, full insert sequence. |
GenBank | CU406213 | 0.0 | CU406213.1 Oryza rufipogon (W1943) cDNA clone: ORW1943C108D05, full insert sequence. |