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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ONIVA02G22170.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
MYB |
Protein Properties |
Length: 323aa MW: 37074.3 Da PI: 10.6384 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ONIVA02G22170.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 49.5 | 9.5e-16 | 9 | 58 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48
r+rW +eEd +l+ +v+q+G++ W++++++m+ ++R +k+c +rw +yl
ONIVA02G22170.1 9 RQRWRPEEDAILLAYVRQYGPREWSLVSQRMNrpLHRDAKSCLERWKNYL 58
89**********************************************97 PP
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2 | Myb_DNA-binding | 34.2 | 5.9e-11 | 64 | 108 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+g+ T +E+ l +++ +++G++ Wk+Ia++++ gRt+k + +w +
ONIVA02G22170.1 64 KGSLTDDEQRLVIRLQAKHGNK-WKKIAAEVP-GRTAKRLGKWWEVF 108
57789*****************.*********.*****999999766 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0008356 | Biological Process | asymmetric cell division |
GO:0009615 | Biological Process | response to virus |
GO:0009651 | Biological Process | response to salt stress |
GO:0009733 | Biological Process | response to auxin |
GO:0009739 | Biological Process | response to gibberellin |
GO:0009751 | Biological Process | response to salicylic acid |
GO:0009753 | Biological Process | response to jasmonic acid |
GO:0009944 | Biological Process | polarity specification of adaxial/abaxial axis |
GO:0010338 | Biological Process | leaf formation |
GO:0042742 | Biological Process | defense response to bacterium |
GO:0045088 | Biological Process | regulation of innate immune response |
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
GO:0046686 | Biological Process | response to cadmium ion |
GO:0050832 | Biological Process | defense response to fungus |
GO:0000793 | Cellular Component | condensed chromosome |
GO:0005730 | Cellular Component | nucleolus |
GO:0003677 | Molecular Function | DNA binding |
GO:0042803 | Molecular Function | protein homodimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 323 aa
Download sequence Send
to blast |
MQPPPMRERQ RWRPEEDAIL LAYVRQYGPR EWSLVSQRMN RPLHRDAKSC LERWKNYLRP 60 GIKKGSLTDD EQRLVIRLQA KHGNKWKKIA AEVPGRTAKR LGKWWEVFKE KQQRELRDRD 120 RRRLPPPLDG DERGGAGGRY DWLLEDFADK LVNDHHRRMM AAPILPPWMS SSPSSSSSPS 180 VTLSLASAAV APAPAAPPPT EMEEGQRAWA AHRKEAAWRM KRVEMQLETE RACRRREAAE 240 EFEAKMRALR EEQAAAVERV EAEYREKMAG LRRDAEAKEQ KMAEQWAAKH ARLAKFLDQV 300 AACRRWPPVE INGGGGGGPG GGR
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor required for normal cell differentiation. May interact with other proteins to repress the knox homeobox genes (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CP012620 | 0.0 | CP012620.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 12 sequence. |
GenBank | CT828749 | 0.0 | CT828749.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA053P05, full insert sequence. |