![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | ONIVA02G11660.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 277aa MW: 28674.3 Da PI: 6.4055 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.2 | 2.7e-11 | 150 | 196 | 5 | 51 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 kr +r NR +A+rsR RK+++i eLe+ v +L+ e +aL ++ ONIVA02G11660.1 150 KRVKRILANRQSAQRSRVRKLQYISELERSVTTLQMEVSALSPRVAF 196 899**********************************9999877655 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.1E-13 | 146 | 210 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.611 | 148 | 204 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 6.0E-14 | 150 | 204 | No hit | No description |
SuperFamily | SSF57959 | 1.27E-11 | 150 | 204 | No hit | No description |
Pfam | PF00170 | 7.6E-10 | 150 | 200 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 4.75E-21 | 151 | 201 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 153 | 168 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 277 aa Download sequence Send to blast |
MAQLPPRAPS AAAAAAAAAG QEWSAMAAAG EFLGFAAARR GAHRRSASDS AAFLMEAAVP 60 MDDVIVGVGG GGEFDRLDDE QLMSMFSDVE APAVSDGGGG GGGGERGPAG EAHLMDMGDG 120 DDGMGATSPA GAGAMAAAAA AAADGIADPK RVKRILANRQ SAQRSRVRKL QYISELERSV 180 TTLQMEVSAL SPRVAFLDHQ RSLLTVGNSH LKQRIAALAQ DKIFKDAHQE ALKKEIERLR 240 QVYHQQQIKA TGGADIATAA SMQAKHELLA CEGAAMR |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Transcription regulator. {ECO:0000250}. |
Regulation -- Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | INDUCTION: By white light. {ECO:0000269|PubMed:18065552}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | |||
GenBank | CP012610 | 0.0 | CP012610.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 2 sequence. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_015622790.1 | 1e-136 | basic leucine zipper 19 | ||||
Swissprot | Q6K3R9 | 1e-137 | BZP19_ORYSJ; Basic leucine zipper 19 | ||||
TrEMBL | A0A0E0G4A1 | 0.0 | A0A0E0G4A1_ORYNI; Uncharacterized protein | ||||
STRING | ONIVA02G11660.1 | 0.0 | (Oryza nivara) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1322 | 38 | 125 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G58120.1 | 3e-57 | bZIP family protein |