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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ONIVA02G07240.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
C2H2 |
Protein Properties |
Length: 198aa MW: 20726.9 Da PI: 5.5997 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ONIVA02G07240.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 13.4 | 0.00022 | 84 | 106 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
+ C++C + F ++ L H++ H
ONIVA02G07240.1 84 FACHYCRREFYSSQALGGHQNAH 106
78******************988 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 198 aa
Download sequence Send
to blast |
MEGMSKLAGG GGDVTFVGGG RRMAAAAAAA LRLVELDLIG TVGAAVPGQA TAPRLLVVSP 60 APAKEEDEEE ERDGDDDGEP RQLFACHYCR REFYSSQALG GHQNAHKRER TLARRGAGAG 120 AGGEQASSSS FAIHHGAFVS ASPGWMARVL HGEAPPAISV AGDGGGGERW WWGGGNVGYY 180 WPRDGDDQTR QLDLTLKL
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP004087 | 0.0 | AP004087.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OJ1297_C09. |
GenBank | AP014958 | 0.0 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. |
GenBank | CP012610 | 0.0 | CP012610.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 2 sequence. |
GenBank | CT835407 | 0.0 | CT835407.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA122P15, full insert sequence. |