 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
ONIVA01G46270.3 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
C2H2 |
| Protein Properties |
Length: 293aa MW: 31988.9 Da PI: 4.5183 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| ONIVA01G46270.3 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 14.4 | 0.00011 | 266 | 289 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23
y C+ C+k+F++++ L+ H + H
ONIVA01G46270.3 266 YACKPCNKTFNTSMGLEAHSKAkH 289
78999**************88777 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 293 aa
Download sequence Send
to blast |
METTMGFWGV AVRPGETVMC DPPGEFYYHI SQIALEPGEL NENVQVFGEV DGKRILLGTL 60
SVEHRDESDE EVPLAIPLFP NSDDDKIKEV QNSPSKFATL KSAAAASPTP EAIVEERKNY 120
GKSEADDDDS DEESDASGED EYDDEEDMID KQDSSDDDGD SSDEEETPSK NTKGTNRHVE 180
TPLNTPPQKR ARLATPIMDS KAGTGKRSGY VHVATPYPAK QAKKTPVNND MAKQSSGYVH 240
VATPYPAKQA KKRTANNDMS EHSAGYACKP CNKTFNTSMG LEAHSKAKHT ATK
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK241121 | 1e-174 | AK241121.1 Oryza sativa Japonica Group cDNA, clone: J065094J12, full insert sequence. |
